PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.2G286000.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 211aa    MW: 23079.4 Da    PI: 10.2202
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.2G286000.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH42.31.4e-133991155
                        CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
                 HLH  1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
                        ++++h e+E++RR+++   ++ Lr++lP       ++K s ae   +Av+YIk+Lq
  Prupe.2G286000.1.p 39 KKMMHREIEKKRRQEMAALYASLRSVLPLeY---IKGKRSLAEHMNEAVNYIKHLQ 91
                        6899*************************77...*********************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000836.07E-123695No hitNo description
SuperFamilySSF474598.57E-1637113IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.4183890IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.8E-103991IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.8E-1040106IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.9E-44496IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    Send to blast
MDVGMFNNIN TGGQQRKSSL ALTLDSAENQ DKSNDDGKKK MMHREIEKKR RQEMAALYAS  60
LRSVLPLEYI KGKRSLAEHM NEAVNYIKHL QTRIKVLGRR RDELKIGTSS LPSLSASSST  120
SSTSPRVAVH PCFGGVEIVI SRGGSVEQGL VLSRLLKILL GQGLTVISCA TTQVNGRLVY  180
TIQSEVSDPA WGDFSGLQQI LTESLTRFSN *
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008234323.11e-120PREDICTED: transcription factor bHLH120-like
SwissprotQ9FLI06e-49BH120_ARATH; Transcription factor bHLH120
TrEMBLM5XL523e-87M5XL52_PRUPE; Uncharacterized protein (Fragment)
STRINGVIT_16s0022g02240.t012e-54(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF79233125
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51790.11e-47bHLH family protein